The detailed information of tRNA gene sequence


Sequence ID>WENV170976108
Genome IDMTKZ01004585
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7178
End posion on genome 7254
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagaaaagt
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCGTCGGAATCATAATCCGCAGGTCCGGGGTTCAAA
TCCCTGCGCCGCTACCA
Downstream region at tRNA end position 
atttttttct
Secondary structure (Cloverleaf model)
>WENV170976108	Met	CAT
                   t      ACCA atttttttct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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