The detailed information of tRNA gene sequence


Sequence ID>WENV170976111
Genome IDMTKZ01004610
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3998
End posion on genome 3906
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatctacta
tRNA gene sequence 
GGAGAAGTCGCCTAGCCTGGTCGAGGGCGCACGACTGGAAATCGTGTAAACCCCAAAAGG
GTTTCGAGAGTTCGAATCTCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tataaggacg
Secondary structure (Cloverleaf model)
>WENV170976111	Ser	GGA
                   a      GCCA tataaggacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
    C C G A        C      | | | | |     G
  T         T C C G       G A G A G     C
  G         + | | |                 T T
  G         G G G C
    T C G A        G     TAAACCCCAAAAGGGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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