The detailed information of tRNA gene sequence


Sequence ID>WENV170976113
Genome IDMTKZ01004630
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2125
End posion on genome 2048
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctccgcacgc
tRNA gene sequence 
AGGTCTGTAGCTCGAACTGGTTAGAGCACCGCACTCCAAATGCGGGGGTTGAGGGTTCGA
ATCCTTCCAGGCCTGCCA
Downstream region at tRNA end position 
ttttgttttt
Secondary structure (Cloverleaf model)
>WENV170976113	Trp	CCA
                   c      GCCA ttttgttttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T T C C     A
    C A A G        A      | | + | |     G
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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