The detailed information of tRNA gene sequence


Sequence ID>WENV170976129
Genome IDMTKZ01004805
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 20028
End posion on genome 20121
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagagaaatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCGAAGGCGCTCGACTCGAAATCGAGTAGGCAGTGCTGAGC
TGTCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttgaagaaaa
Secondary structure (Cloverleaf model)
>WENV170976129	Ser	CGA
                   t      GCCA ttgaagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAGGCAGTGCTGAGCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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