The detailed information of tRNA gene sequence


Sequence ID>WENV170976132
Genome IDMTKZ01004834
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5355
End posion on genome 5431
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatgcgccgt
tRNA gene sequence 
GCCGGTGTAGCTCAGACGGTTAGAGCACGCGGCTCATATCCGCGGCGTCCGGGGTTCGAT
TCCCTGCACCGGCACCA
Downstream region at tRNA end position 
ttttttccac
Secondary structure (Cloverleaf model)
>WENV170976132	Met	CAT
                   t      ACCA ttttttccac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GCGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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