The detailed information of tRNA gene sequence


Sequence ID>WENV170976149
Genome IDMTKZ01005001
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 47162
End posion on genome 47252
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaggactaag
tRNA gene sequence 
GGAGAGATGCAGGAGTGGCTTAACTGGCCCGCCTGGAAAGCGAGTATACCCCAAAAGGGT
ATCGGGGGTTCGAATCCCCCTCTCTCCGCAA
Downstream region at tRNA end position 
ctccggatta
Secondary structure (Cloverleaf model)
>WENV170976149	Ser	GGA
                   g      GCAA ctccggatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    C       A C T G
      T T A        G     TATACCCCAAAAGGGTATC
                    C - G
                    C   A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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