The detailed information of tRNA gene sequence


Sequence ID>WENV170976168
Genome IDMTKZ01005375
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 690
End posion on genome 617
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gcaagagagc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttg
Downstream region at tRNA end position 
ctgtttttcc
Secondary structure (Cloverleaf model)
>WENV170976168	Val	GAC
                   c      Attg ctgtttttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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