The detailed information of tRNA gene sequence


Sequence ID>WENV170976172
Genome IDMTKZ01005412
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3362
End posion on genome 3437
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gttcgacttc
tRNA gene sequence 
GGGGTTTTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGAAT
CCCCTAAGCTCCACCA
Downstream region at tRNA end position 
ggtaattata
Secondary structure (Cloverleaf model)
>WENV170976172	Ala	GGC
                   c      ACCA ggtaattata
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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