The detailed information of tRNA gene sequence


Sequence ID>WENV170976179
Genome IDMTKZ01005514
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16920
End posion on genome 16996
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcttaacaa
tRNA gene sequence 
CGGGGATTGGCGCAATTGGCTAGCGTACACGCTTCGGGTGCGTGAGGTTGCAGGTTCGAA
TCCTGTATCCCCGACAA
Downstream region at tRNA end position 
aaaaccaagt
Secondary structure (Cloverleaf model)
>WENV170976179	Pro	CGG
                   a      ACAA aaaaccaagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C G C G       G C A G G     C
    G       | | | +                 T T
    G       G C G T
      C T A        A     AGGTT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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