The detailed information of tRNA gene sequence


Sequence ID>WENV170976186
Genome IDMTKZ01005578
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5838
End posion on genome 5754
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gaatcctcaa
tRNA gene sequence 
GCCGAAGTGGCGGAATAGGCAGACGCGCTACGTTCAGGGCGTAGTGGGCAAAGCGCCCGT
GAGAGTTCAAATCTCTCCTTCGGCAtaa
Downstream region at tRNA end position 
acgcagtcaa
Secondary structure (Cloverleaf model)
>WENV170976186	Leu	CAG
                   a      Ataa acgcagtcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T A A        G      | | | | |     A
    A       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCAAAGCGCCCGT
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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