The detailed information of tRNA gene sequence


Sequence ID>WENV170976191
Genome IDMTKZ01005624
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2160
End posion on genome 2235
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttccccttgc
tRNA gene sequence 
GGCCCGTTCATCTAGGGGTCTAGGATGCGGGATTCTCAGTCCCGTCACAGGAGTTCAAAT
CTCCTACGGGCTGCCA
Downstream region at tRNA end position 
tctttcattt
Secondary structure (Cloverleaf model)
>WENV170976191	Glu	CTC
                   c      GCCA tctttcattt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C T C     A
      G G A        C      | | | | |     A
    G       T C T A       A G G A G     C
    G       + | | |                 T T
    T       G G A T
      C T A        G     TCAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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