The detailed information of tRNA gene sequence


Sequence ID>WENV170976192
Genome IDMTKZ01005638
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2661
End posion on genome 2574
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taagtttttt
tRNA gene sequence 
GGAGCGATGGGTGAGAGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGTGACCGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCag
Downstream region at tRNA end position 
aaaacaaggc
Secondary structure (Cloverleaf model)
>WENV170976192	Ser	GCT
                   t      GCag aaaacaaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     C   T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTGACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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