The detailed information of tRNA gene sequence


Sequence ID>WENV170976195
Genome IDMTKZ01005654
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2708
End posion on genome 2784
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccgcacacgc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCACCTGCCTTACACGCAGGGGGTCACAGGTTCGAG
TCCTGTACCGCCCACCA
Downstream region at tRNA end position 
ttttatcttt
Secondary structure (Cloverleaf model)
>WENV170976195	Val	TAC
                   c      ACCA ttttatcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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