The detailed information of tRNA gene sequence


Sequence ID>WENV170976205
Genome IDMTKZ01005719
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 19272
End posion on genome 19346
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttggcggcgc
tRNA gene sequence 
GGCGCGTTCGTCTATCGGTTAGGACACGGCCCTCTCAAGGCTGAAAGATGGGTTCGATTC
CCATACGCGCTGCCA
Downstream region at tRNA end position 
aacgcaatcc
Secondary structure (Cloverleaf model)
>WENV170976205	Glu	CTC
                   c      GCCA aacgcaatcc
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     T A C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A T G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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