The detailed information of tRNA gene sequence


Sequence ID>WENV170976222
Genome IDMTKZ01005801
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 29626
End posion on genome 29536
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcttcctaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGGCGGCCTCGAAAGCCGTTGTGCGGTTTTACCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttattctctt
Secondary structure (Cloverleaf model)
>WENV170976222	Ser	CGA
                   a      GCCA ttattctctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCGGTTTTACCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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