The detailed information of tRNA gene sequence


Sequence ID>WENV170976231
Genome IDMTKZ01005863
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4871
End posion on genome 4796
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcttgaaaag
tRNA gene sequence 
GGGCCTGTAGCGCAGTTGGGAGCGCGCCTCAATCGCACTGAGGAGGCCAGGGGTTCGAAT
CCCCTCAGGTCCACCT
Downstream region at tRNA end position 
ggggtggatc
Secondary structure (Cloverleaf model)
>WENV170976231	Ala	CGC
                   g      ACCT ggggtggatc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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