The detailed information of tRNA gene sequence


Sequence ID>WENV170976232
Genome IDMTKZ01005863
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4749
End posion on genome 4676
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agcatgtcct
tRNA gene sequence 
GGGCCCATAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGCCGGGGGTTCGAAT
CCCCCTGGGTCCACac
Downstream region at tRNA end position 
ttaaaggcaa
Secondary structure (Cloverleaf model)
>WENV170976232	Ala	GGC
                   t      ACac ttaaaggcaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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