The detailed information of tRNA gene sequence


Sequence ID>WENV170976251
Genome IDMTKZ01006021
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1655
End posion on genome 1581
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcctgcggg
tRNA gene sequence 
GGCGGCGTAGCCAAGTGGTAAGGCAGCGGATTGCAAATCCGCCATTCAGCGGTTCGACTC
CGCTCGCCGCCTCCA
Downstream region at tRNA end position 
ggaaagcctc
Secondary structure (Cloverleaf model)
>WENV170976251	Cys	GCA
                   g      TCCA ggaaagcctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T C G C C     A
        G A        A      | | | | |     G
      T     A C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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