The detailed information of tRNA gene sequence


Sequence ID>WENV170976256
Genome IDMTKZ01006064
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1139
End posion on genome 1050
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcccggcgc
tRNA gene sequence 
GGAGAGGTGCCCGAGCGGTTTAAGGGAACGGTCTTGAAAACCGTCCTGGTGGCAACGCCA
GCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatttgagcg
Secondary structure (Cloverleaf model)
>WENV170976256	Ser	TGA
                   c      GCCA gatttgagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      T T A        A     CCTGGTGGCAACGCCAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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