The detailed information of tRNA gene sequence


Sequence ID>WENV170976279
Genome IDMTKZ01006297
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5224
End posion on genome 5298
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgagatctat
tRNA gene sequence 
CGGGGATTGGCGCAATTGGCTAGCGTGCATGGTTTGGGACCATGAGGTTGCAGGTTCGAA
TCCTGTATCCCCGACtt
Downstream region at tRNA end position 
cggtccgccg
Secondary structure (Cloverleaf model)
>WENV170976279	Pro	TGG
                   t      ACtt cggtccgccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C G C G       G C A G G     C
    G       | | | +                 T T
    G       G C G T
      C T A        G     AGGTT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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