The detailed information of tRNA gene sequence


Sequence ID>WENV170976291
Genome IDMTKZ01006422
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 77110
End posion on genome 77197
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gattgccgtc
tRNA gene sequence 
GGAGGGCTGGCCGAGTGGTCGAAGGCGGCTGACTTGAAATCAGCAGGGGCGCAAGTCTCC
AGGGGTTCGAATCCTCTGCCCTCCGCCA
Downstream region at tRNA end position 
gtttttggtt
Secondary structure (Cloverleaf model)
>WENV170976291	Ser	TGA
                   c      GCCA gtttttggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     AGGGGCGCAAGTCTCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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