The detailed information of tRNA gene sequence


Sequence ID>WENV170976299
Genome IDMTKZ01006422
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 54418
End posion on genome 54343
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccaaaaaaat
tRNA gene sequence 
GCCGGCGTAGCTCAGTTGGCAGAGCAGCGCACTCGTAATGCGCAGGTCGGCGGTTCAAGT
CCGCCCGCCGGCTCCA
Downstream region at tRNA end position 
aggctcatcg
Secondary structure (Cloverleaf model)
>WENV170976299	Thr	CGT
                   t      TCCA aggctcatcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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