The detailed information of tRNA gene sequence


Sequence ID>WENV170976307
Genome IDMTKZ01006467
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6302
End posion on genome 6395
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcagaaatcc
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTGTATGCCCCCAAAGG
TGTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
agaacggata
Secondary structure (Cloverleaf model)
>WENV170976307	Ser	GGA
                   c      GCCA agaacggata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTATGCCCCCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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