The detailed information of tRNA gene sequence


Sequence ID>WENV170976322
Genome IDMTKZ01006648
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1445
End posion on genome 1520
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acaataaaga
tRNA gene sequence 
GCCTCCATCGTCTAGGGGACCAGGACACAACCCTTTCAAGGTTAAAACAAGAGTTCGAAT
CTCTTTGGAGGTGCAA
Downstream region at tRNA end position 
aaaacatccc
Secondary structure (Cloverleaf model)
>WENV170976322	Glu	TTC
                   a      GCAA aaaacatccc
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     T T C T C     A
      G G A        C      | | | | |     G
    G       T C T G       A A G A G     C
    G       + | | |                 T T
    A       G G A C
      C C A        A     AAAC
                    C   A
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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