The detailed information of tRNA gene sequence


Sequence ID>WENV170976338
Genome IDMTKZ01006793
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13581
End posion on genome 13493
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actggtcgac
tRNA gene sequence 
GGTGACGTGTCCGAGCGGCCGAAGGTGCAACTCTCGAAAAGTTGTGTAGGGTAACCCCCT
ACCGTGGGTTCAAATCCCACCGTCACCGCtc
Downstream region at tRNA end position 
ttacgaaggc
Secondary structure (Cloverleaf model)
>WENV170976338	Ser	CGA
                   c      GCtc ttacgaaggc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTAGGGTAACCCCCTACC
                    C - G
                    A - T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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