The detailed information of tRNA gene sequence


Sequence ID>WENV170976362
Genome IDMTKZ01007044
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16115
End posion on genome 16021
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatctccggt
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGATTGCTAATCCGCTGTACTGGTATAATGC
CGGTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gattcaatcg
Secondary structure (Cloverleaf model)
>WENV170976362	Ser	GCT
                   t      GCCA gattcaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTACTGGTATAATGCCGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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