The detailed information of tRNA gene sequence


Sequence ID>WENV170976363
Genome IDMTKZ01007044
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15519
End posion on genome 15429
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aacaagatct
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTTATCGCGCACGACTCGAAATCGTGTAGACCTTAACGGT
CTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtttctgcaa
Secondary structure (Cloverleaf model)
>WENV170976363	Ser	CGA
                   t      GCCA gtttctgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  C         G A C G       G T G G G     C
  G         +   | |                 T T
  G         T C G C
    T T T A        G     TAGACCTTAACGGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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