The detailed information of tRNA gene sequence


Sequence ID>WENV170976365
Genome IDMTKZ01007044
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 14423
End posion on genome 14333
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacatgatgc
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGTTTAATCGGCACGCCTGGAGAGCGTGTGTACCTCTCAAGGGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttccttcccc
Secondary structure (Cloverleaf model)
>WENV170976365	Ser	GGA
                   c      GCCA ttccttcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T T A        G     TGTACCTCTCAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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