The detailed information of tRNA gene sequence


Sequence ID>WENV170976376
Genome IDMTKZ01007162
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7879
End posion on genome 7808
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgcgcgtta
tRNA gene sequence 
GGCGAGGTAGCTCAACGGTGGAGCAGTGGACTCATAAGCCATTGGTTCTGGGTTCAAATC
CCAGCCTCGCCAttt
Downstream region at tRNA end position 
tttgttttaa
Secondary structure (Cloverleaf model)
>WENV170976376	Met	CAT
                   a      Attt tttgttttaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
        A A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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