The detailed information of tRNA gene sequence


Sequence ID>WENV170976380
Genome IDMTKZ01007218
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8685
End posion on genome 8771
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tggtccctgT
tRNA gene sequence 
GCCGAGGTAGTCTAGCCCGGAAAGGCGATGGTCTCGAAAACCATTGGCGCCCTGCGCCTC
GGGAGTTCAAATCTCCCCCTCGGCGTgc
Downstream region at tRNA end position 
cggatcttct
Secondary structure (Cloverleaf model)
>WENV170976380	Ser	CGA
                   T      GTgc cggatcttct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGCGCCCTGCGCCTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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