The detailed information of tRNA gene sequence


Sequence ID>WENV170976381
Genome IDMTKZ01007219
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 20
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattgataa
tRNA gene sequence 
CGCGAGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGAAGGTTCGAAT
CCTTCCCTCGCTACCA
Downstream region at tRNA end position 
attttttaga
Secondary structure (Cloverleaf model)
>WENV170976381	Met	CAT
                   a      ACCA attttttaga
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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