The detailed information of tRNA gene sequence


Sequence ID>WENV170976386
Genome IDMTKZ01007231
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5100
End posion on genome 5175
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcgacgccgt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGACT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
tccttcccat
Secondary structure (Cloverleaf model)
>WENV170976386	Ala	GGC
                   t      ACCA tccttcccat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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