The detailed information of tRNA gene sequence


Sequence ID>WENV170976403
Genome IDMTKZ01007358
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4793
End posion on genome 4868
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tcaaaagcgt
tRNA gene sequence 
GGCGAGATAGCTCAGTCGGTAGAGCAGAGGCCTGAAAAGCCTTGTGTCCCCAGTTCGATT
CTGGGTTTCGCCACCA
Downstream region at tRNA end position 
tttttttctc
Secondary structure (Cloverleaf model)
>WENV170976403	Phe	GAA
                   t      ACCA tttttttctc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     A - T          T T
                    T     G G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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