The detailed information of tRNA gene sequence


Sequence ID>WENV170976416
Genome IDMTKZ01007558
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 67751
End posion on genome 67654
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agccagccac
tRNA gene sequence 
GGAAGTGCCAAGGTCACTGGTGGGCCTCCCGGACTTCAAATCCGGAGTGAGGGGCTAGAC
ACCTCTCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
gtaaattcaa
Secondary structure (Cloverleaf model)
>WENV170976416	SeC(p)	TCA
                   c      GCCA gtaaattcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     AGTGAGGGGCTAGACACCTCTCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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