The detailed information of tRNA gene sequence


Sequence ID>WENV170976425
Genome IDMTKZ01007645
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 332
End posion on genome 407
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctgcctgtac
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGTGCCTGTCTCCAAAACAGGAGGTTGCGGGTTCGATT
CCTGCCTGGCCTGCCA
Downstream region at tRNA end position 
aaaagtgaga
Secondary structure (Cloverleaf model)
>WENV170976425	Trp	CCA
                   c      GCCA aaaagtgaga
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      C A          G     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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