The detailed information of tRNA gene sequence


Sequence ID>WENV170976438
Genome IDMTKZ01007798
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1925
End posion on genome 2001
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ggtcggtctt
tRNA gene sequence 
GCGCCTCTAGCTCAATTGGTTAGAGCGTCGGACTCTTAATCCGTAGGTTCCGGGTTCGAG
TCCCGGGGGGCGTACAA
Downstream region at tRNA end position 
aaccgagacc
Secondary structure (Cloverleaf model)
>WENV170976438	Lys	CTT
                   t      ACAA aaccgagacc
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G G C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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