The detailed information of tRNA gene sequence


Sequence ID>WENV170976440
Genome IDMTKZ01007806
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 240
End posion on genome 147
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgggcaccac
tRNA gene sequence 
GGAGAGGTGTCCGAGTTGGCTTAAGGAGCGCGACTGGAAATCGCGTGGGCGGGGACGACC
TGCCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcatccccgc
Secondary structure (Cloverleaf model)
>WENV170976440	Ser	GGA
                   c      GCCA gcatccccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G T G G G     C
  G           | | |                 T T
  C         A G G A
    T T A          G     TGGGCGGGGACGACCTGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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