The detailed information of tRNA gene sequence


Sequence ID>WENV170976447
Genome IDMTKZ01007870
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1810
End posion on genome 1725
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcatgacc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCTATGGCGGCGGTCTTGAAAACCGTTGACCGAAAGGTTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gttcataatc
Secondary structure (Cloverleaf model)
>WENV170976447	Ser	TGA
                   c      GCCA gttcataatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TGACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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