The detailed information of tRNA gene sequence


Sequence ID>WENV170976452
Genome IDMTKZ01007890
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 26104
End posion on genome 26028
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taccaatcgg
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCAGTGGAATCATAATCCACGTGTCCGGGGTTCGAA
TCCCTGCACCGCTACCA
Downstream region at tRNA end position 
gcanngggga
Secondary structure (Cloverleaf model)
>WENV170976452	Met	CAT
                   g      ACCA gcanngggga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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