The detailed information of tRNA gene sequence


Sequence ID>WENV170976457
Genome IDMTKZ01007977
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2886
End posion on genome 2810
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcttcgcttt
tRNA gene sequence 
GGGGGCGTGGTGTAGTGGTCGAACATGCGGCCCTGTCAAGGCCGAGACCGCGGGTTCAAA
TCCCGTCGCTCCCGCTA
Downstream region at tRNA end position 
gaaaaagaaa
Secondary structure (Cloverleaf model)
>WENV170976457	Asp	GTC
                   t      GCTA gaaaaagaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C G A        G     AGACC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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