The detailed information of tRNA gene sequence


Sequence ID>WENV170976458
Genome IDMTKZ01007989
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 34305
End posion on genome 34391
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgcgcccaat
tRNA gene sequence 
GCCGGGGTGGCGAAATTGGCAGACGCACCGGACTCAAAATCCGGCGGTAGCGATACCGTG
AGGGTTCGACTCCCTCTCCCGGCACCA
Downstream region at tRNA end position 
tcctttgcct
Secondary structure (Cloverleaf model)
>WENV170976458	Leu	CAA
                   t      ACCA tcctttgcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T C
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGTAGCGATACCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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