The detailed information of tRNA gene sequence


Sequence ID>WENV170976462
Genome IDMTKZ01008009
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1102
End posion on genome 1014
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgccgttttt
tRNA gene sequence 
GGAGAGATGCAGGAGTGGCTGAACTGGCTCGCCTGGAAAGCGAGTATACCTCAAAAGGGT
ATCGGGGGTTCGAATCCCCCTCTCTCCGCtg
Downstream region at tRNA end position 
aaagactcag
Secondary structure (Cloverleaf model)
>WENV170976462	Ser	GGA
                   t      GCtg aaagactcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    C       A C T G
      T G A        G     TATACCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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