The detailed information of tRNA gene sequence


Sequence ID>WENV170976466
Genome IDMTKZ01008098
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1026
End posion on genome 937
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttctaaatac
tRNA gene sequence 
GGAGAAGTCGCATAGTTTGGCCTAGTGCGCACGACTGGAAATCGTGTATCCCGCAAGGGG
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtattgaaac
Secondary structure (Cloverleaf model)
>WENV170976466	Ser	GGA
                   c      GCCA gtattgaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A   C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TATCCCGCAAGGGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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