The detailed information of tRNA gene sequence


Sequence ID>WENV170976489
Genome IDMTKZ01008307
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2205
End posion on genome 2116
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcctgccgc
tRNA gene sequence 
GGAAGGGTGGCTGAGTGGTTAAAGGCACCTGACTCGAAATCAGGCGTAGGGGTAACCCTA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gttctataac
Secondary structure (Cloverleaf model)
>WENV170976489	Ser	CGA
                   c      GCCA gttctataac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T A A        A     CGTAGGGGTAACCCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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