The detailed information of tRNA gene sequence


Sequence ID>WENV170976506
Genome IDMTKZ01008598
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9034
End posion on genome 9123
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtcctcagc
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGACGGTCTCGAAAACCGTTGAGCACGCAAGTGTT
CCAAGGGTTCAAATCCCTTACTCTCCGCCA
Downstream region at tRNA end position 
ttcgtttccc
Secondary structure (Cloverleaf model)
>WENV170976506	Ser	CGA
                   c      GCCA ttcgtttccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAGCACGCAAGTGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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