The detailed information of tRNA gene sequence


Sequence ID>WENV170976513
Genome IDMTKZ01008632
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12876
End posion on genome 12788
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcgcaccgt
tRNA gene sequence 
GGAGGCGTATCCTAATTGGCTAAGGAGCCGGTCTTGAAAATCGGTGGGGTTGACGCCCCT
TGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
gtaaccggga
Secondary structure (Cloverleaf model)
>WENV170976513	Ser	TGA
                   t      GCCA gtaaccggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        A      | | | | |     G
    T       T C C T       G T G G G     C
    G       | | | |                 T T
    G       A G G A
      C T A        G     TGGGGTTGACGCCCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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