The detailed information of tRNA gene sequence


Sequence ID>WENV170976523
Genome IDMTKZ01008779
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3675
End posion on genome 3599
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtccacacgt
tRNA gene sequence 
AGCGAGATGGAGCAGTTGGTAGCTCGCCGGGTTCATATCCCGGAGTCCGCAGGTTCGAGT
CCTGTTCTCGCCCACC
Downstream region at tRNA end position 
Aaagcaagcg
Secondary structure (Cloverleaf model)
>WENV170976523	Met	CAT
                   t      CACC Aaagcaagcg
                     A   C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        G      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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