The detailed information of tRNA gene sequence


Sequence ID>WENV170976531
Genome IDMTKZ01008946
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1196
End posion on genome 1284
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taatcggtaT
tRNA gene sequence 
GGAGAGATGACAGAGTGGTCGAATGTGACGGTCTTGAAAACCGTTGTACGCTTATGTGTA
CCGTGGGTTCGAATCCCACTCTCTCCGTtt
Downstream region at tRNA end position 
tattcaattg
Secondary structure (Cloverleaf model)
>WENV170976531	Ser	TGA
                   T      GTtt tattcaattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G         | | |                 T T
    T       A T G T
      C G A        G     TGTACGCTTATGTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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