The detailed information of tRNA gene sequence


Sequence ID>WENV170976549
Genome IDMTKZ01009211
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3537
End posion on genome 3626
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccccacttg
tRNA gene sequence 
GGAGAGGTGACCGAGCGGTTTAAGGTGCACGCTTGGAAAGCGTGTGTACGTGAAAGCGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttaacacc
Secondary structure (Cloverleaf model)
>WENV170976549	Ser	GGA
                   g      GCCA gtttaacacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T T A        G     TGTACGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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