The detailed information of tRNA gene sequence


Sequence ID>WENV170976553
Genome IDMTKZ01009258
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1118
End posion on genome 1025
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catgaggcgc
tRNA gene sequence 
GGAGAGATGTCTGAGAGGCCGAAGGAGCACGACTGGAAATCGTGTGTACGCCCACAAAGG
TGTACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
tgaataaaag
Secondary structure (Cloverleaf model)
>WENV170976553	Ser	GGA
                   c      GCCA tgaataaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + | |                 T T
    C       A G G A
      C G A        G     TGTACGCCCACAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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